S. cerevisiae - Kluyveromyces lactis RSTs

mips


Table of sequenced K. lactis fragments closer to proteins of other species than to S. cerevisiae (5 entries)

List of the K. lactis RSTs closer related to proteins of other species than to S. cerevisiae.

 

K. lactis RST

K. lactis and other genome comparison

Nomenclature

Accession n

Sequence Size (nuc.)

BLASTX Smallest Sum Probability P(N)

Brief identification

Species

am1a04d

AJ229366

409

3.0 E-41

D-arabinitol dehydrogenase (EC 1.1.1-)

C. albicans

 

 

 

3.4 E-41

D-arabinitol dehydrogenase (EC 1.1.1-)

C. tropicalis

 

 

 

5.8 E-41

D-arabinitol dehydrogenase (EC 1.1.1-)

P. stipitis

 

 

 

 

 

 

am2f05d

AJ229451

261

6.0 E-18

Putative agmatinase precursor (EC 3.5.3.11)

S. pombe

 

 

 

2.0 E-08

Possible agmatinase (EC 3.5.3.11)

S. clavuligerus

 

 

 

4.9 E-06

Hypothetical agmatase (EC 3.5.3.11)

M. fervidus

 

 

 

 

 

 

okam5d07r

AJ229891

230

0.1 E-10

Beta-ketoacyl-ACP reductase (EC 1.1.1.100)

C. lanceolata

 

 

 

0.2 E-10

Hypothetical protein 5

Xanthobacter sp

 

 

 

6.3 E-10

Hypothetical oxidoreductase

B. subtilis

 

 

 

 

 

 

am2d01d

AJ229435

151

2.9 E-07

YOL5_CAEEL hypothetical 45.3 KD protein

C. elegans

 

 

 

 

 

 

okam1d10r

AJ229574

268

0.2 E-06

Acetamidase (EC 3.5.1.4)

A. nidulans

 

 

 

 

 

 

SWISS-PROT (release 34, ref 1) and our laboratory database were used for comparison.

The latter is composed of 46 630 translation prod ucts of complete sequenced genomes of ten bact eria (ref 2, 3, 5, 6, 7, 9, 11, 12, 13 and 14), three archaea (ref 4, 8 and 10) and of 81% of the Caenorhabditis elegans genome (ref 15)