Yeast - A new nomenclature for the cytoplasmic ribosomal proteins of Saccharomyces cerevisiae

mips


Mager WH, Planta RJ, Ballesta JG, Lee JC, Mizuta K, Suzuki K, Warner JR, Woolford J; Nucleic Acids Res. 25(24): 4872-4875 (1997)


rp-name

gene name

ORF

previous protein
designations

previous gene
designations

mammalian homologues

further homologies to

CAI

intron

S0A
S0B

RPS0A
RPS0B

YGR214w
YLR048w

 

NAB1A
NAB1B

rat Sa

 

0.81
0.72

+
+

S1A
S1B

RPS1A
RPS1B

YLR441c
YML063w

rp10

PLC1
PLC2

rat S3a

 

0.79
0.84

-
-

S2

RPS2

YGL123w

S4, rp12, YS5

SUP44

rat S2

E.coli S5

0.91

-

S3

RPS3

YNL178w

S3, rp13, YS3

 

mamm. S3

 

0.86

-

S4A
S4B

RPS4A
RPS4B

YJR145c
YHR203c

S7, rp5, YS6

 

rat, hum. S4

 

0.70
0.71

+
+

S5

RPS5

YJR123w

S2, rp14, YS8

 

mamm. S5

 

0.84

-

S6A
S6B

RPS6A
RPS6B

YPL090c
YBR181c

S10, rp9, YS4

 

rat, mouse, hum. S6

 

0.83
0.85

+
+

S7A
S7B

RPS7A
RPS7B

YOR096w
YNL096c

rp30

 

hum. S7

Xen. S8

0.75
0.60

+
+

S8A
S8B

RPS8A
RPS8B

YBL072c
YER102w

S14, rp19, YS9

 

mamm. S8

 

0.75
0.72

+(leader)
+(leader)

S9A
S9B

RPS9A
RPS9B

YPL081w
YBR189w

S13, rp21, YS11


SUP46

rat S9

E.coli S4

0.51
0.81

+
+

S10A
S10B

RPS10A
RPS10B

YOR293w
YMR230w

 

 

rat S10

 

0.84
0.80

+
+

S11A
S11B

RPS11A
RPS11B

YDR025w
YBR048w

S18, rp41, YS12

 

rat, hum. S11

E.coli S17

0.71
0.73

+
+

S12

RPS12

YOR369c

S12

 

rat S12

 

0.84

-

S13

RPS13

YDR064w

S27a, YS15

 

rat S13

 

0.78

+

S14A
S14B

RPS14A
RPS14B

YCR031c
YJL191w

rp59

CRY1
CRY2

mamm. S14

E.coli S11

0.76
0.59

+
+

S15

RPS15

YOL040c

S21, rp52

 

rat S15

E.coli S19

0.77

-

rp-name

gene name

ORF

previous protein
designations

previous gene
designations

mammalian homologues

further homologies to

CAI

intron

S16A
S16B

RPS16A
RPS16B

YMR143w
YDL083c

rp61R

 

rat S16

 

0.68
0.76

+
+

S17A
S17B

RPS17A
RPS17B

YML024w
YDR447c

rp51

 

rat S17

 

0.81
0.76

+
+

S18A
S18B

RPS18A
RPS18B

YDR450w
YML026c

 

 

rat S18

E.coli S13

0.78
0.73

+
+

S19A
S19B

RPS19A
RPS19B

YOL121c
YNL302c

S16a, rp55, YS16

 

rat S19

 

0.79
0.76

+
+

S20

RPS20

YHL015w

 

URP2

rat, hum. S20

Xen. S22; E.coli S10

0.83

-

S21A
S21B

RPS21A
RPS21B

YKR057w
YJL136c

S26, YS25

 

rat S21

 

0.60
0.83

+
+

S22A
S22B

RPS22A
RPS22B

YJL190c
YLR367w

S24, rp50, YS22

 

rat S15a

 

0.81
0.52

-
++(leader)

S23A
S23B

RPS23A
RPS23B

YGR118w
YPR132w

S28, rp37, YS14

 

rat S23

E.coli S12

0.73
0.79

+
+

S24A
S24B

RPS24A
RPS24B

YER074w
YIL069c

 


rat S24

 

0.82
0.76

+
+

S25A
S25B

RPS25A
RPS25B

YGR027c
YLR333c

S31, rp45, YS23

 

rat S25

 

0.72
0.61

+(leader)
+(leader)

S26A
S26B

RPS26A
RPS26B

YGL189c
YER131w

 

RPS26

rat S26

 

0.78
0.71

+(leader)
+(leader)

S27A
S27B

RPS27A
RPS27B

YKL156w
YHR021c

S27, rp61, YS20

 

mamm. S27

 

0.36
0.66

+
+

S28A
S28B

RPS28A
RPS28B

YOR167c
YLR264w

S33, YS27

 

mamm. S28

 

0.53
0.56

-
-

S29A
S29B

RPS29A
RPS29B

YLR388w
YDL061c

S36, YS29

 

rat S29

 

0.65
0.76

-
-

S30A
S30B

RPS30A
RPS30B

YLR287c-a
YOR182c

 

 

mamm. S30

 

0.75
0.64

+
+

S31

RPS31

YLR167w

S37, YS24

UBI3

rat S27a

 

0.81

-

rp-name

gene name

ORF

previous protein
designations

previous gene
designations

mammalian homologues

further homologies to

CAI

intron

P0

RPP0

YLR340w

A0

RPLA0

rat, hum. P0

E.coli L10e

0.79

-

P1A
P1B

RPP1A
RPP1B

YDL081c
YDL130w

YP1a, A1
L44', YP1b, Ax

RPLA1
RPLA3

rat, hum. P1

E.coli L12eIIA
E.coli L12eIIB

0.71
0.71

-
+

P2A
P2B

RPP2A
RPP2B

YOL039w
YDR382w

L44, YP2a, A2
L45, YP2b

RPLA2
RPLA4

rat, hum. P2

E.coli L12eIB
E.coli L12eIA

0.80
0.76

-
-

L1A
L1B

RPL1A
RPL1B

YPL220w
YGL135w

 

SSM1A
SSM1B

rat L10a

eu,arch.bact. L1

0.82
0.83

-
-

L2A
L2B

RPL2A
RPL2B

YFR031c-a
YIL018w

L5, rp8, YL6

 

rat L8

E.coli L2

0.77
0.76

+
+

L3

RPL3

YOR063w

L3, rp1, YL1

TCM1

rat L3

 

0.83

-

L4A
L4B

RPL4A
RPL4B

YBR031w
YDR012w

L2, rp2, YL2

 

rat L4

Xen., Dros. L1

0.83
0.81

-
-

L5

RPL5

YPL131w

L1a

 

rat L5

 

0.83

-

L6A
L6B

RPL6A
RPL6B

YML073c
YLR448w

L17, rp18, YL16

 

rat, hum. L6

 

0.67
0.63

+
+

L7A
L7B

RPL7A
RPL7B

YGL076c
YPL198w

L6, rp11, YL8

 

rat L7

E.coli L30

0.76
0.72

++
++

L8A
L8B

RPL8A
RPL8B

YHL033c
YLL045c

L4, rp6, YL5

 

rat, mouse, hum. L7a

 

0.84
0.85

-
-

L9A
L9B

RPL9A
RPL9B

YGL147c
YNL067w

L8, rp24, YL11

 

rat L9

E.coli L6

0.77
0.78

-
-

L10

RPL10

YLR075w

 

GRC5

rat L10

 

0.83

-

L11A
L11B

RPL11A
RPL11B

YPR102c
YGR085c

L16, rp39, YL22

 

rat L11

E.coli L5

0.78
0.73

-
-

L12A
L12B

RPL12A
RPL12B

YEL054c
YDR418w

L15, YL23

 

rat L12a

E.coli L11

0.61
0.77

-
-

L13A
L13B

RPL13A
RPL13B

YDL082w
YMR142c

 

 

rat L13

 

0.65
0.74

+
+

rp-name

gene name

ORF

previous protein
designations

previous gene
designations

mammalian homologues

further homologies to

CAI

intron

L14A
L14B

RPL14A
RPL14B

YKL006w
YHL001w

 

 

mamm. L14

 

0.68
0.68

+
+

L15A
L15B

RPL15A
RPL15B

YLR029c
YMR121c

L13, rp15R, YL10

 

rat L15

 

0.78
0.44

-
-

L16A
L16B

RPL16A
RPL16B

YIL133c
YNL069c

L21, rp22, YL15
L21, rp23, YL15

 

rat L13a

 

0.61
0.72

+
+

L17A
L17B

RPL17A
RPL17B

YKL180w
YJL177w

L20, YL17

 

rat, hum. L17

E.coli L22

0.81
0.68

+
+

L18A
L18B

RPL18A
RPL18B

YOL120c
YNL301c

rp28

 

rat L18

 

0.81
0.68

+
+

L19A
L19B

RPL19A
RPL19B

YBR084c-a
YBL027w

L23, rp15L, YL14

 

rat L19

 

0.69
0.71

+
+

L20A
L20B

RPL20A
RPL20B

YMR242c
YOR312c

 

 

rat L18a

 

0.67
0.70

+
+

L21A
L21B

RPL21A
RPL21B

YBR191w
YPL079w

 

URP1

rat L21

 

0.69
0.73

+
+

L22A
L22B

RPL22A
RPL22B

YLR061w
YFL034c-a

L1c, rp4, YL31

 

rat L22

 

0.86
0.86

+
+

L23A
L23B

RPL23A
RPL23B

YBL087c
YER117w

L17a, YL32

 

rat L23

E.coli L14

0.62
0.65

+
+

L24A
L24B

RPL24A
RPL24B

YGL031c
YGR148c

L30, rp29, YL21

 

rat L24

 

0.76
0.76

+(leader)
+(leader)

L25

RPL25

YOL127w

L25, rp16L, YL25

 

rat L23a

E.coli L23

0.75

+

L26A
L26B

RPL26A
RPL26B

YLR344w
YGR034w

L33, YL33

 

rat L26

 

0.63
0.68

+
+

L27A
L27B

RPL27A
RPL27B

YHR010w
YDR471w

 

 

mamm. L27

 

0.74
0.52

+
+

L28

RPL28

YGL103w

L29, rp44, YL24

CYH2

rat, mouse L27a

 

0.71

+

L29

RPL29

YFR032c-a

YL43

 

rat L29

 

0.68

+(leader)

L30

RPL30

YGL030w

L32, rp73, YL38

 

rat, mouse L30

 

0.87

+

rp-name

gene name

ORF

previous protein
designations

previous gene
designations

mammalian homologues

further homologies to

CAI

intron

L31A
L31B

RPL31A
RPL31B

YDL075w
YLR406c

L34, YL28

 

rat L31

 

0.83
0.63

+
+

L32

RPL32

YBL092w

 

 

rat, mamm. L32

 

0.82

+(leader)

L33A
L33B

RPL33A
RPL33B

YPL143w
YOR234c

L37, rp47, YL37

 

rat L35a

 

0.75
0.73

+
+

L34A
L34B

RPL34A
RPL34B

YER056c-a
YIL052c

 

 

rat L34

 

0.76
0.78

+
+

L35A
L35B

RPL35A
RPL35B

YDL191w
YDL136w

 

SOS1
SOS2

rat L35

 

0.80
0.76

+
+

L36A
L36B

RPL36A
RPL36B

YMR194w
YPL249c-a

L39, YL39

 

rat L36

 

0.62
0.62

+
+

L37A
L37B

RPL37A
RPL37B

YLR185w
YDR500c

L43, YL35

 

rat L37

 

0.70
0.71

+
+

L38

RPL38

YLR325c

 

 

rat L38

 

0.78

-

L39

RPL39

YJL189w

L46, YL40

PUB2

rat L39

 

0.92

+

L40A
L40B

RPL40A
RPL40B

YIL148w
YKR094c

 

UBI1
UBI2

rat L40

 

0.74
0.74

+
+

L41A
L41B

RPL41A
RPL41B

YDL184c
YDL133c-a

L47, YL41

 

hum. L41

 

0.42
0.42

-
-

L42A
L42B

RPL42A
RPL42B

YNL162w
YHR141c

L41, YL27

 

rat, hum. L36a

 

0.63
0.80

+
+

L43A
L43B

RPL43A
RPL43B

YPR043w
YJR094w-a

 

 

hum. L37a

 

0.87
0.88

+
+


Generated Mon Jan 26 1998