Last update: Tue Oct 30 15:06:35 CET 2001
Predicted localisation in membranes based on putative transmembrane spans.
calculation of these spans was performed with the ALOM program which
applies the KKD algorithm.
P. Klein, M. Kanehisa & C. Delisi (1985)
The detection and
classification of membrane-spanning proteins
Biochim. Biophys. Acta (1985) 815, 468-76.
We have assigned an ORF as a transmembrane protein if a single span has a P:I
(periphal:integral) odd smaller than 0 (zero) in minimum.
The P:I odd threshold value for more than one span is 15.
See A. Goffeau, K. Nakai, P. Slominski, J.-L. Risler (1993)
The membrane proteins encoded by yeast chromosome III genes
FEBS Let. 325: 112-117.